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  5. Solyc03g119540.3.1

Solyc03g119540.3.1


Description : transcription factor (BBX-CO)


Gene families : OG0000884 (Archaeplastida) Phylogenetic Tree(s): OG0000884_tree ,
OG_05_0000594 (LandPlants) Phylogenetic Tree(s): OG_05_0000594_tree ,
OG_06_0000583 (SeedPlants) Phylogenetic Tree(s): OG_06_0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g119540.3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.03 Archaeplastida
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
MA_96860g0010 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Mp2g16350.1 No alias transcription factor (BBX-CO) 0.05 Archaeplastida
Pp3c18_13350V3.1 No alias B-box type zinc finger protein with CCT domain 0.04 Archaeplastida
Pp3c22_5440V3.1 No alias B-box type zinc finger protein with CCT domain 0.03 Archaeplastida
Pp3c7_23900V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
Zm00001e030952_P002 No alias transcription factor (BBX-CO) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000315 Znf_B-box 17 60
IPR010402 CCT_domain 349 391
No external refs found!