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  4. Sequence
  5. Solyc03g119905.1.1

Solyc03g119905.1.1


Description : no hits & (original description: none)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g119905.1.1

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500094.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc01g065625.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g065987.1.1 No alias No annotation 0.33 Archaeplastida
Solyc01g067045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc03g031487.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc03g083485.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc03g111705.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Solyc03g150108.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc04g150127.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g150146.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc05g050825.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc06g034395.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc06g036255.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g019493.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 Archaeplastida
Solyc07g044985.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Solyc08g062725.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g065543.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc08g067025.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g068713.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc08g074655.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc09g074575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 Archaeplastida
Solyc09g150145.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.2 Archaeplastida
Solyc10g008455.1.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc10g018203.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc11g027895.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.03 Archaeplastida
Solyc11g056595.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida
Solyc12g011233.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!