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  5. Solyc03g120630.4.1

Solyc03g120630.4.1


Description : component psRPS17 of small ribosomal subunit proteome


Gene families : OG0001873 (Archaeplastida) Phylogenetic Tree(s): OG0001873_tree ,
OG_05_0008425 (LandPlants) Phylogenetic Tree(s): OG_05_0008425_tree ,
OG_06_0009671 (SeedPlants) Phylogenetic Tree(s): OG_06_0009671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g120630.4.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00201470 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.07 Archaeplastida
AT1G79850 RPS17, CS17, PRPS17 ribosomal protein S17 0.16 Archaeplastida
Cre02.g118950 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
GSVIVT01017072001 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
Gb_07769 No alias component psRPS17 of small ribosomal subunit proteome 0.1 Archaeplastida
MA_10123473g0010 No alias component psRPS17 of small ribosomal subunit proteome 0.04 Archaeplastida
Mp5g05080.1 No alias component psRPS17 of small ribosomal subunit proteome 0.2 Archaeplastida
Pp3c11_14630V3.1 No alias ribosomal protein S17 0.09 Archaeplastida
Pp3c1_12860V3.1 No alias ribosomal protein S17 0.09 Archaeplastida
Zm00001e028738_P001 No alias component psRPS17 of small ribosomal subunit proteome 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 59 123
No external refs found!