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  5. Solyc03g120850.4.1

Solyc03g120850.4.1


Description : subunit beta of Cpn60 chaperonin complex. component CPN60b of CPN60 assembly chaperone complex. chaperone (Hsp60)


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001792 (LandPlants) Phylogenetic Tree(s): OG_05_0001792_tree ,
OG_06_0001989 (SeedPlants) Phylogenetic Tree(s): OG_06_0001989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g120850.4.1
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260480 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.06 Archaeplastida
AMTR_s00009p00080200 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.04 Archaeplastida
AMTR_s00062p00185880 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.09 Archaeplastida
AMTR_s00106p00119930 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.06 Archaeplastida
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.22 Archaeplastida
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.02 Archaeplastida
AT2G33210 HSP60-2 heat shock protein 60-2 0.03 Archaeplastida
AT5G56500 No alias TCP-1/cpn60 chaperonin family protein 0.04 Archaeplastida
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Cpa|evm.model.tig00001269.7 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre17.g741450 No alias External stimuli response.temperature.Hsp... 0.09 Archaeplastida
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
LOC_Os06g02380.2 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
LOC_Os09g38980.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
LOC_Os12g17910.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.06 Archaeplastida
MA_542957g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.03 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.08 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.08 Archaeplastida
Pp3c6_20400V3.1 No alias chaperonin 60 beta 0.12 Archaeplastida
Pp3c8_16290V3.1 No alias chaperonin-60alpha 0.08 Archaeplastida
Smo165043 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Smo168153 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Smo405358 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Zm00001e001025_P002 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Zm00001e006438_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Zm00001e025409_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Zm00001e029825_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.11 Archaeplastida
Zm00001e031536_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.15 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
MF GO:0004832 valine-tRNA ligase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006433 prolyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006438 valyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 83 585
No external refs found!