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  5. Solyc03g121600.4.1

Solyc03g121600.4.1


Description : omega-hydroxy fatty acyl dehydrogenase


Gene families : OG0000176 (Archaeplastida) Phylogenetic Tree(s): OG0000176_tree ,
OG_05_0000864 (LandPlants) Phylogenetic Tree(s): OG_05_0000864_tree ,
OG_06_0000685 (SeedPlants) Phylogenetic Tree(s): OG_06_0000685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121600.4.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00060130 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
AT1G72970 EDA17, HTH Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
AT5G51930 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Archaeplastida
GSVIVT01010650001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01016856001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
Gb_12981 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_33524 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10434331g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_115358g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_210150g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e004200_P002 No alias omega-hydroxy fatty acyl dehydrogenase 0.04 Archaeplastida
Zm00001e033949_P001 No alias omega-hydroxy fatty acyl dehydrogenase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 57 329
IPR007867 GMC_OxRtase_C 425 571
No external refs found!