Solyc03g121630.3.1

Description : transcription factor (FAR1)

Gene families : OG0000638 (Archaeplastida) Phylogenetic Tree(s): OG0000638_tree ,
OG_05_0000359 (LandPlants) Phylogenetic Tree(s): OG_05_0000359_tree ,
OG_06_0000420 (SeedPlants) Phylogenetic Tree(s): OG_06_0000420_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g121630.3.1
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AT4G19990	FRS1	FAR1-related sequence 1	0.03	Archaeplastida
GSVIVT01030079001	No alias	RNA biosynthesis.transcriptional activation.FAR1...	0.05	Archaeplastida
LOC_Os03g62660.1	No alias	transcription factor (FAR1)	0.03	Archaeplastida
LOC_Os08g06930.1	No alias	transcription factor (FAR1)	0.02	Archaeplastida
LOC_Os12g12380.1	No alias	transcription factor (FAR1)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007527	Znf_SWIM	514	542
IPR018289	MULE_transposase_dom	228	320
IPR004330	FAR1_DNA_bnd_dom	28	115

External Links

No external refs found!