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  5. Solyc03g121700.4.1

Solyc03g121700.4.1


Description : histone chaperone (NAP)


Gene families : OG0001309 (Archaeplastida) Phylogenetic Tree(s): OG0001309_tree ,
OG_05_0001356 (LandPlants) Phylogenetic Tree(s): OG_05_0001356_tree ,
OG_06_0002445 (SeedPlants) Phylogenetic Tree(s): OG_06_0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121700.4.1
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00136p00114090 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone... 0.02 Archaeplastida
LOC_Os05g46230.1 No alias histone chaperone (NAP) 0.04 Archaeplastida
Pp3c25_4540V3.1 No alias nucleosome assembly protein 1;2 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002164 NAP_family 62 309
No external refs found!