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  5. Solyc03g121950.3.1

Solyc03g121950.3.1


Description : Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana (sp|q94am9|cid4_arath : 321.0)


Gene families : OG0003256 (Archaeplastida) Phylogenetic Tree(s): OG0003256_tree ,
OG_05_0003358 (LandPlants) Phylogenetic Tree(s): OG_05_0003358_tree ,
OG_06_0004023 (SeedPlants) Phylogenetic Tree(s): OG_06_0004023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121950.3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
Gb_36727 No alias Polyadenylate-binding protein-interacting protein 4... 0.03 Archaeplastida
MA_10437165g0010 No alias Polyadenylate-binding protein-interacting protein 4... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025852 SM_dom_ATX 55 138
IPR009604 LsmAD_domain 214 284
No external refs found!