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  5. AMTR_s00024p00206190

AMTR_s00024p00206190 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.190

Description : Protein Brevis radix-like 2 OS=Arabidopsis thaliana


Gene families : OG0001106 (Archaeplastida) Phylogenetic Tree(s): OG0001106_tree ,
OG_05_0000672 (LandPlants) Phylogenetic Tree(s): OG_05_0000672_tree ,
OG_06_0000629 (SeedPlants) Phylogenetic Tree(s): OG_06_0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00206190
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015117001 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01015118001 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g63650.1 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Solyc08g005460.3.1 No alias Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g096110.3.1 No alias Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e006397_P001 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Zm00001e007054_P001 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e015552_P003 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Zm00001e041570_P002 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 317 349
IPR013591 Brevis_radix_dom 136 193
No external refs found!