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Description : helicase (SEN1)
Gene families : OG0000652 (Archaeplastida) Phylogenetic Tree(s): OG0000652_tree ,
OG_05_0004656 (LandPlants) Phylogenetic Tree(s): OG_05_0004656_tree ,
OG_06_0005772 (SeedPlants) Phylogenetic Tree(s): OG_06_0005772_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc03g124010.3.1 | |
| Cluster | HCCA: Cluster_173 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00239150 | evm_27.TU.AmTr_v1... | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| AMTR_s00025p00188660 | evm_27.TU.AmTr_v1... | RNA biosynthesis.RNA polymerase II-dependent... | 0.09 | Archaeplastida | |
| AMTR_s00119p00113940 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
| AT1G16800 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.08 | Archaeplastida | |
| AT4G30100 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.05 | Archaeplastida | |
| Cre01.g040379 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.01 | Archaeplastida | |
| Cre03.g187950 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Cre06.g263800 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
| GSVIVT01014679001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
| GSVIVT01029557001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.04 | Archaeplastida | |
| Gb_01813 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Gb_33974 | No alias | helicase (SEN1) | 0.05 | Archaeplastida | |
| LOC_Os06g20500.1 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os09g32180.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os09g32190.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| MA_13389g0020 | No alias | helicase (SEN1) | 0.03 | Archaeplastida | |
| MA_208026g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| MA_88596g0010 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.09 | Archaeplastida | |
| Mp5g19520.1 | No alias | helicase (SEN1) | 0.02 | Archaeplastida | |
| Mp7g11100.1 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Pp3c19_7860V3.1 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.03 | Archaeplastida | |
| Smo444379 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | Archaeplastida | |
| Zm00001e002590_P001 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Zm00001e012042_P001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006473 | protein acetylation | IEP | Neighborhood |
| BP | GO:0006474 | N-terminal protein amino acid acetylation | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
| CC | GO:0016459 | myosin complex | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0017196 | N-terminal peptidyl-methionine acetylation | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
| BP | GO:0018206 | peptidyl-methionine modification | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| CC | GO:0030118 | clathrin coat | IEP | Neighborhood |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Neighborhood |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Neighborhood |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| MF | GO:0031072 | heat shock protein binding | IEP | Neighborhood |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Neighborhood |
| BP | GO:0031365 | N-terminal protein amino acid modification | IEP | Neighborhood |
| CC | GO:0031414 | N-terminal protein acetyltransferase complex | IEP | Neighborhood |
| CC | GO:0031417 | NatC complex | IEP | Neighborhood |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043543 | protein acylation | IEP | Neighborhood |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140104 | molecular carrier activity | IEP | Neighborhood |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| CC | GO:1902493 | acetyltransferase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |