AMTR_s00024p00217410 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.206

Description : Solute transport.channels.MSL mechanosensitive ion channel

Gene families : OG0000539 (Archaeplastida) Phylogenetic Tree(s): OG0000539_tree ,
OG_05_0000961 (LandPlants) Phylogenetic Tree(s): OG_05_0000961_tree ,
OG_06_0002221 (SeedPlants) Phylogenetic Tree(s): OG_06_0002221_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00024p00217410
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp8g14680.1	No alias	mechanosensitive ion channel (MSL)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0030684	preribosome	IEP	Neighborhood
CC	GO:0032040	small-subunit processome	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006685	MscS_channel	562	766

External Links

No external refs found!