Solyc04g005015.1.1


Description : no hits & (original description: none)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g005015.1.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Gb_03554 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Solyc01g015133.1.1 No alias No annotation 0.05 Archaeplastida
Solyc01g058685.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g150117.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.06 Archaeplastida
Solyc02g150117.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.11 Archaeplastida
Solyc03g031555.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.06 Archaeplastida
Solyc04g074195.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Solyc05g016717.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.09 Archaeplastida
Solyc06g011407.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.11 Archaeplastida
Solyc06g033955.1.1 No alias no hits & (original description: none) 0.18 Archaeplastida
Solyc06g050135.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida
Solyc07g017605.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc07g043485.1.1 No alias No annotation 0.11 Archaeplastida
Solyc07g045455.1.1 No alias No annotation 0.1 Archaeplastida
Solyc07g056702.1.1 No alias No annotation 0.06 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.02 Archaeplastida
Solyc08g041825.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc08g042065.1.1 No alias No annotation 0.04 Archaeplastida
Solyc08g065695.1.1 No alias No annotation 0.14 Archaeplastida
Solyc08g066495.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc09g059748.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g018197.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.14 Archaeplastida
Solyc10g049287.1.1 No alias No annotation 0.11 Archaeplastida
Solyc10g049365.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.04 Archaeplastida
Solyc11g063747.1.1 No alias No annotation 0.1 Archaeplastida
Solyc12g036475.1.1 No alias No annotation 0.06 Archaeplastida
Solyc12g040817.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc12g042565.1.1 No alias No annotation 0.09 Archaeplastida
Solyc12g150112.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!