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  5. Solyc04g005100.3.1

Solyc04g005100.3.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree ,
OG_06_0000467 (SeedPlants) Phylogenetic Tree(s): OG_06_0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g005100.3.1
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00135880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G19000 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01014754001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014756001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01016996001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_12629 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Gb_38499 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os01g64360.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os08g04840.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os10g41200.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os10g41260.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_10432875g0030 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_9437011g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Smo130556 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Smo84280 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g082390.1.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc09g014250.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025946_P002 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e031755_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e040277_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 88 132
No external refs found!