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  5. Solyc04g005130.3.1

Solyc04g005130.3.1


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0000169 (SeedPlants) Phylogenetic Tree(s): OG_06_0000169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g005130.3.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00184910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00079p00137860 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
AT1G18400 BEE1 BR enhanced expression 1 0.04 Archaeplastida
AT1G25330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Gb_12493 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Gb_22201 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os02g47660.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
LOC_Os06g08500.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os06g09370.2 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_10344244g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10432919g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_120179g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_158850g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Pp3c21_14114V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc03g119390.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc12g036470.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e036318_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 110 157
No external refs found!