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  5. Solyc04g005340.2.1

Solyc04g005340.2.1


Description : UDP-L-arabinose mutase


Gene families : OG0001314 (Archaeplastida) Phylogenetic Tree(s): OG0001314_tree ,
OG_05_0000942 (LandPlants) Phylogenetic Tree(s): OG_05_0000942_tree ,
OG_06_0001571 (SeedPlants) Phylogenetic Tree(s): OG_06_0001571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g005340.2.1
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00209120 evm_27.TU.AmTr_v1... Carbohydrate metabolism.nucleotide sugar... 0.04 Archaeplastida
AT5G15650 RGP2, ATRGP2 reversibly glycosylated polypeptide 2 0.05 Archaeplastida
Cre13.g565800 No alias Carbohydrate metabolism.nucleotide sugar... 0.06 Archaeplastida
GSVIVT01008133001 No alias Carbohydrate metabolism.nucleotide sugar... 0.03 Archaeplastida
LOC_Os03g40270.1 No alias UDP-L-arabinose mutase 0.11 Archaeplastida
LOC_Os04g56520.2 No alias UDP-L-arabinose mutase 0.05 Archaeplastida
LOC_Os07g41360.1 No alias UDP-L-arabinose mutase 0.08 Archaeplastida
MA_18309g0010 No alias UDP-L-arabinose mutase 0.02 Archaeplastida
Mp2g10790.1 No alias UDP-L-arabinose mutase 0.05 Archaeplastida
Mp2g10800.1 No alias UDP-L-arabinose mutase 0.08 Archaeplastida
Pp3c15_23740V3.1 No alias reversibly glycosylated polypeptide 2 0.06 Archaeplastida
Pp3c15_23760V3.1 No alias reversibly glycosylated polypeptide 2 0.04 Archaeplastida
Pp3c15_23780V3.1 No alias reversibly glycosylated polypeptide 2 0.07 Archaeplastida
Smo140071 No alias Carbohydrate metabolism.nucleotide sugar... 0.06 Archaeplastida
Smo76446 No alias Carbohydrate metabolism.nucleotide sugar... 0.03 Archaeplastida
Zm00001e006668_P001 No alias UDP-L-arabinose mutase 0.03 Archaeplastida
Zm00001e012459_P003 No alias UDP-L-arabinose mutase 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
CC GO:0034998 oligosaccharyltransferase I complex IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR037595 RGP_fam 12 346
No external refs found!