Solyc04g005380.3.1

Description : transcriptional co-repressor (AFP/NINJA)

Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0000404 (SeedPlants) Phylogenetic Tree(s): OG_06_0000404_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g005380.3.1
Cluster	HCCA: Cluster_171

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00255370	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional repression.AFP/NINJA...	0.04	Archaeplastida
AT1G69260	AFP1	ABI five binding protein	0.04	Archaeplastida
AT3G29575	AFP3	ABI five binding protein 3	0.1	Archaeplastida
GSVIVT01003927001	No alias	RNA biosynthesis.transcriptional repression.AFP/NINJA...	0.07	Archaeplastida
GSVIVT01008104001	No alias	RNA biosynthesis.transcriptional repression.AFP/NINJA...	0.02	Archaeplastida
GSVIVT01012225001	No alias	RNA biosynthesis.transcriptional repression.AFP/NINJA...	0.07	Archaeplastida
LOC_Os03g11550.1	No alias	transcriptional co-repressor (AFP/NINJA)	0.09	Archaeplastida
LOC_Os03g30570.1	No alias	transcriptional co-repressor (AFP/NINJA)	0.06	Archaeplastida
LOC_Os07g41160.1	No alias	transcriptional co-repressor (AFP/NINJA)	0.04	Archaeplastida
MA_16384g0010	No alias	transcriptional co-repressor (AFP/NINJA)	0.11	Archaeplastida
MA_2575g0010	No alias	transcriptional co-repressor (AFP/NINJA)	0.03	Archaeplastida
Smo446487	No alias	RNA biosynthesis.transcriptional repression.AFP/NINJA...	0.03	Archaeplastida
Solyc02g030633.1.1	No alias	transcriptional co-repressor (AFP/NINJA)	0.06	Archaeplastida
Zm00001e035495_P001	No alias	transcriptional co-repressor (AFP/NINJA)	0.1	Archaeplastida
Zm00001e038719_P006	No alias	transcriptional co-repressor (AFP/NINJA)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032310	NINJA_B	127	261
IPR032308	Jas	311	375
IPR012463	Ninja_motif	65	100

External Links

No external refs found!