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  5. Solyc04g005610.3.1

Solyc04g005610.3.1


Description : transcription factor (NAC)


Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g005610.3.1
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00193150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00003p00252470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.08 Archaeplastida
AMTR_s00009p00259320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00010p00260100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00017p00255350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00025p00174590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00068p00207380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00071p00055960 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00079p00099620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00113p00077540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00119p00026870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00119p00040230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.06 Archaeplastida
AMTR_s00119p00045570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AT1G12260 EMB2749,... NAC 007 0.04 Archaeplastida
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.03 Archaeplastida
AT1G32770 ANAC012, NST3,... NAC domain containing protein 12 0.04 Archaeplastida
AT1G33280 BRN1, ANAC015, NAC015 NAC domain containing protein 15 0.04 Archaeplastida
AT1G52890 ANAC019, NAC019 NAC domain containing protein 19 0.09 Archaeplastida
AT1G56010 anac021, NAC1, ANAC022 NAC domain containing protein 1 0.04 Archaeplastida
AT1G61110 NAC025, anac025 NAC domain containing protein 25 0.05 Archaeplastida
AT1G62700 VND5, ANAC026 Arabidopsis NAC domain containing protein 26 0.03 Archaeplastida
AT1G65910 anac028, NAC028 NAC domain containing protein 28 0.04 Archaeplastida
AT1G71930 ANAC030, VND7 vascular related NAC-domain protein 7 0.04 Archaeplastida
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT1G77450 NAC032, anac032 NAC domain containing protein 32 0.03 Archaeplastida
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.03 Archaeplastida
AT2G24430 ANAC039, NAC038, ANAC038 NAC domain containing protein 38 0.04 Archaeplastida
AT2G33480 NAC041, ANAC041 NAC domain containing protein 41 0.09 Archaeplastida
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G04060 anac046, NAC046 NAC domain containing protein 46 0.04 Archaeplastida
AT3G04070 anac047, NAC047 NAC domain containing protein 47 0.07 Archaeplastida
AT3G12910 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G12977 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT3G15170 ANAC054, ATNAC1, CUC1 NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
AT3G15500 ATNAC3, ANAC055,... NAC domain containing protein 3 0.11 Archaeplastida
AT3G15510 NARS1, NAC2,... NAC domain containing protein 2 0.06 Archaeplastida
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.07 Archaeplastida
AT3G29035 ATNAC3, NAC3, ANAC059 NAC domain containing protein 3 0.04 Archaeplastida
AT4G27410 RD26, ANAC072 NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT4G28530 anac074, NAC074 NAC domain containing protein 74 0.06 Archaeplastida
AT4G36160 VND2, NAC076, ANAC076 NAC domain containing protein 76 0.04 Archaeplastida
AT5G07680 ANAC080,... NAC domain containing protein 80 0.04 Archaeplastida
AT5G13180 VNI2, NAC083, ANAC083 NAC domain containing protein 83 0.04 Archaeplastida
AT5G39610 NAC2, ORE1,... NAC domain containing protein 6 0.03 Archaeplastida
AT5G39820 NAC094, anac094 NAC domain containing protein 94 0.03 Archaeplastida
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.03 Archaeplastida
AT5G62380 NAC101, VND6, ANAC101 NAC-domain protein 101 0.03 Archaeplastida
GSVIVT01001264001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01006485001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01008291001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
GSVIVT01008839001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01013419001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01014287001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01014405001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01018623001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01018809001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01020384001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01020389001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01020478001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01020834001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01022354001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01023123001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01027431001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
GSVIVT01028354001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.01 Archaeplastida
GSVIVT01034485001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01035554001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
GSVIVT01036682001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
Gb_01375 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_02849 No alias transcription factor (NAC) 0.05 Archaeplastida
Gb_05670 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_07132 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_13957 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_22607 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_27819 No alias transcription factor (KNOX). transcription factor (NAC) 0.01 Archaeplastida
Gb_28016 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_35048 No alias transcription factor (NAC) 0.05 Archaeplastida
Gb_35309 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_37720 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_41026 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os01g01430.1 No alias transcription factor (NAC) 0.01 Archaeplastida
LOC_Os01g60020.1 No alias transcription factor (NAC) 0.06 Archaeplastida
LOC_Os01g66120.1 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os02g15340.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os02g41450.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os02g56600.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os03g21030.1 No alias transcription factor (NAC) 0.06 Archaeplastida
LOC_Os03g21060.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os03g42630.1 No alias transcription factor (NAC) 0.06 Archaeplastida
LOC_Os03g60080.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os04g38720.1 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os04g59470.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os05g34600.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os05g34830.1 No alias transcription factor (NAC) 0.07 Archaeplastida
LOC_Os06g01230.1 No alias transcription factor (NAC) 0.01 Archaeplastida
LOC_Os06g04090.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os06g51070.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os07g12340.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os07g37920.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os07g48450.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os07g48550.1 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os08g02160.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os08g10080.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os09g32260.2 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os10g33760.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os11g03370.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os11g08210.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os12g03040.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os12g29330.1 No alias transcription factor (NAC) 0.06 Archaeplastida
MA_109677g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_112054g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_11879g0010 No alias transcription factor (NAC) 0.01 Archaeplastida
MA_137415g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_138461g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_139896g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_21732g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_23113g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_32763g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_33912g0010 No alias transcription factor (NAC) 0.06 Archaeplastida
MA_40991g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_5017g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_5115g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_64687g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_6777g0010 No alias No annotation 0.04 Archaeplastida
MA_80232g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_95225g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp4g22890.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp6g02620.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp6g02670.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Mp6g20920.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Pp3c13_10800V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.05 Archaeplastida
Pp3c16_19830V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
Pp3c16_23260V3.1 No alias NAC domain containing protein 35 0.03 Archaeplastida
Pp3c20_18130V3.1 No alias NAC domain containing protein 2 0.03 Archaeplastida
Pp3c26_13950V3.1 No alias NAC 007 0.02 Archaeplastida
Pp3c27_7430V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
Pp3c5_570V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
Pp3c5_630V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Pp3c5_740V3.1 No alias NAC domain containing protein 25 0.05 Archaeplastida
Pp3c6_1310V3.1 No alias NAC domain containing protein 70 0.03 Archaeplastida
Pp3c6_28230V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
Solyc01g102740.3.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc02g061780.3.1 No alias transcription factor (NAC) 0.01 Archaeplastida
Solyc02g069960.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc05g007550.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc06g063430.2.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc06g069710.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc08g077110.4.1 No alias transcription factor (NAC) 0.01 Archaeplastida
Solyc09g025310.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc10g005010.4.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc10g006880.3.1 No alias transcription factor (NAC) 0.06 Archaeplastida
Solyc12g017400.3.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc12g036480.2.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e003559_P003 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e004141_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e005094_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e006136_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e006914_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e007411_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e007905_P001 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e008026_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e009234_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e009384_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e010094_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e011786_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e011934_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e012429_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e012982_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e014924_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e019017_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e019046_P002 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e019473_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e022155_P001 No alias transcription factor (NAC) 0.07 Archaeplastida
Zm00001e023108_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e023635_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e029116_P001 No alias transcription factor (NAC) 0.07 Archaeplastida
Zm00001e029188_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e029194_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e029913_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e030150_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e031694_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e031703_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e034574_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e035277_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e035884_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e036590_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e036720_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e037088_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e039246_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e039557_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e040938_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e041236_P002 No alias transcription factor (NAC) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003441 NAC-dom 11 135
No external refs found!