AMTR_s00024p00220830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.217

No description available


Gene families : OG0007417 (Archaeplastida) Phylogenetic Tree(s): OG0007417_tree ,
OG_05_0007152 (LandPlants) Phylogenetic Tree(s): OG_05_0007152_tree ,
OG_06_0007591 (SeedPlants) Phylogenetic Tree(s): OG_06_0007591_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00220830
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT1G72640 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 Archaeplastida
GSVIVT01016774001 No alias No description available 0.05 Archaeplastida
Gb_11587 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_11588 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g29730.1 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_70160g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_911781g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp8g18210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_2100V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
Solyc12g049280.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e001958_P005 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!