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  5. Solyc04g007460.4.1

Solyc04g007460.4.1


Description : no hits & (original description: none)


Gene families : OG0000459 (Archaeplastida) Phylogenetic Tree(s): OG0000459_tree ,
OG_05_0000294 (LandPlants) Phylogenetic Tree(s): OG_05_0000294_tree ,
OG_06_0005584 (SeedPlants) Phylogenetic Tree(s): OG_06_0005584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g007460.4.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00243380 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00071p00184320 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT2G01190 No alias Octicosapeptide/Phox/Bem1p family protein 0.06 Archaeplastida
GSVIVT01005751001 No alias No description available 0.04 Archaeplastida
Gb_05070 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g25780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_2134318g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_72603g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g118870.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000270 PB1_dom 89 173
No external refs found!