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  5. Solyc04g007690.3.1

Solyc04g007690.3.1


Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g007690.3.1
Cluster HCCA: Cluster_485

Target Alias Description ECC score Gene Family Method Actions
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.07 Archaeplastida
AT5G16530 PIN5 Auxin efflux carrier family protein 0.03 Archaeplastida
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01011347001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
Gb_23207 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Gb_29191 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os02g50960.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
MA_61553g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
MA_61553g0020 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Mp5g05140.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Solyc01g068410.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 Archaeplastida
Solyc05g008060.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 Archaeplastida
Zm00001e010118_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e015800_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e023910_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004776 Mem_trans 301 608
IPR004776 Mem_trans 10 238
No external refs found!