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  5. Solyc04g008380.4.1

Solyc04g008380.4.1


Description : transcription factor (BBR/BPC)


Gene families : OG0001410 (Archaeplastida) Phylogenetic Tree(s): OG0001410_tree ,
OG_05_0000887 (LandPlants) Phylogenetic Tree(s): OG_05_0000887_tree ,
OG_06_0000941 (SeedPlants) Phylogenetic Tree(s): OG_06_0000941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008380.4.1
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009845001 No alias RNA biosynthesis.transcriptional activation.BBR/BPC... 0.03 Archaeplastida
LOC_Os06g04010.2 No alias transcription factor (BBR/BPC) 0.03 Archaeplastida
MpVg00350.1 No alias No annotation 0.04 Archaeplastida
Zm00001e036601_P001 No alias transcription factor (BBR/BPC) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 10 290
No external refs found!