Solyc04g008420.1.1

Description : MMD1/DUET meiotic recombination regulating protein. PHD finger transcription factor

Gene families : OG0000911 (Archaeplastida) Phylogenetic Tree(s): OG0000911_tree ,
OG_05_0000834 (LandPlants) Phylogenetic Tree(s): OG_05_0000834_tree ,
OG_06_0001753 (SeedPlants) Phylogenetic Tree(s): OG_06_0001753_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g008420.1.1
Cluster	HCCA: Cluster_201

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00138p00035380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.PHD finger...	0.04	Archaeplastida
GSVIVT01011588001	No alias	RNA biosynthesis.transcriptional activation.PHD finger...	0.14	Archaeplastida
GSVIVT01030666001	No alias	RNA biosynthesis.transcriptional activation.PHD finger...	0.06	Archaeplastida
LOC_Os09g27620.1	No alias	MMD1/DUET meiotic recombination regulating protein. PHD...	0.16	Archaeplastida
Mp3g06700.1	No alias	PHD finger transcription factor	0.02	Archaeplastida
Zm00001e034314_P001	No alias	MMD1/DUET meiotic recombination regulating protein. PHD...	0.18	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	623	669

External Links

No external refs found!