Description : Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana (sp|p0c8q6|pp368_arath : 674.0)
Gene families : OG0010505 (Archaeplastida) Phylogenetic Tree(s): OG0010505_tree ,
OG_05_0010499 (LandPlants) Phylogenetic Tree(s): OG_05_0010499_tree ,
OG_06_0009831 (SeedPlants) Phylogenetic Tree(s): OG_06_0009831_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc04g009220.2.1 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G08310 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.12 | Archaeplastida | |
GSVIVT01026178001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.11 | Archaeplastida | |
LOC_Os05g24930.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | Archaeplastida | |
MA_10426691g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e000884_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.08 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 469 | 516 |
IPR002885 | Pentatricopeptide_repeat | 282 | 326 |
IPR002885 | Pentatricopeptide_repeat | 147 | 186 |
IPR002885 | Pentatricopeptide_repeat | 542 | 586 |
IPR002885 | Pentatricopeptide_repeat | 607 | 656 |
IPR002885 | Pentatricopeptide_repeat | 677 | 726 |
IPR002885 | Pentatricopeptide_repeat | 213 | 242 |
IPR002885 | Pentatricopeptide_repeat | 386 | 406 |
IPR002885 | Pentatricopeptide_repeat | 249 | 276 |
IPR002885 | Pentatricopeptide_repeat | 751 | 774 |
IPR002885 | Pentatricopeptide_repeat | 431 | 460 |
No external refs found! |