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  5. Solyc04g009240.2.1

Solyc04g009240.2.1


Description : Disease resistance protein RPP13 OS=Arabidopsis thaliana (sp|q9m667|rpp13_arath : 450.0)


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009240.2.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00061p00152710 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00088p00057720 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00090p00088070 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00090p00091780 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00090p00137350 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s02154p00002280 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01026825001 No alias Putative disease resistance protein At1g50180... 0.02 Archaeplastida
GSVIVT01032828001 No alias Putative disease resistance protein At1g50180... 0.02 Archaeplastida
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.03 Archaeplastida
Gb_01300 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.04 Archaeplastida
Gb_10845 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_25799 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
Gb_25801 No alias Probable disease resistance protein At5g63020... 0.02 Archaeplastida
Gb_25803 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
Gb_25804 No alias Probable disease resistance protein At1g61180... 0.03 Archaeplastida
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.03 Archaeplastida
Gb_27427 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_32662 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
LOC_Os09g30230.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g04674.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_6828207g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9473823g0010 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
Solyc04g009110.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc04g009690.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc07g039410.3.1 No alias Putative disease resistance RPP13-like protein 3... 0.04 Archaeplastida
Solyc07g053010.3.1 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g053020.3.1 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.06 Archaeplastida
Solyc08g005440.3.1 No alias RPM1 effector-triggered immunity CC-NLR-type effector receptor 0.06 Archaeplastida
Solyc11g010160.1.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036637_P001 No alias Putative disease resistance protein At1g50180... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 165 408
No external refs found!