Solyc04g009250.1.1

Description : Disease resistance protein RPP13 OS=Arabidopsis thaliana (sp|q9m667|rpp13_arath : 446.0)

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g009250.1.1
Cluster	HCCA: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00245940	evm_27.TU.AmTr_v1...	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00006p00263900	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00044p00195990	evm_27.TU.AmTr_v1...	Probable disease resistance RPP8-like protein 2...	0.03	Archaeplastida
AMTR_s00058p00097500	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00061p00086800	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00061p00163970	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00061p00165330	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.05	Archaeplastida
AMTR_s00061p00165400	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00061p00205330	evm_27.TU.AmTr_v1...	Probable disease resistance RPP8-like protein 2...	0.03	Archaeplastida
AMTR_s00061p00207600	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00090p00087950	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00090p00088070	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AMTR_s00090p00091780	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AMTR_s00090p00137350	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00190p00029950	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s02154p00002280	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.05	Archaeplastida
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.07	Archaeplastida
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.06	Archaeplastida
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.06	Archaeplastida
AT5G35450	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	Archaeplastida
GSVIVT01026725001	No alias	Putative disease resistance protein At1g50180...	0.03	Archaeplastida
GSVIVT01026728001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01026745001	No alias	Putative disease resistance protein At1g50180...	0.02	Archaeplastida
Gb_01300	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.04	Archaeplastida
Gb_26463	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.04	Archaeplastida
Gb_40379	No alias	Putative disease resistance protein At1g58400...	0.03	Archaeplastida
MA_180285g0010	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.04	Archaeplastida
MA_423032g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_75771g0010	No alias	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.03	Archaeplastida
Solyc02g084890.3.1	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.05	Archaeplastida
Solyc04g009130.4.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc07g053010.3.1	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.05	Archaeplastida
Solyc08g005440.3.1	No alias	RPM1 effector-triggered immunity CC-NLR-type effector receptor	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055071	manganese ion homeostasis	IEP	Neighborhood
BP	GO:0055076	transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	170	417

External Links

No external refs found!

Solyc04g009250.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation