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  5. Solyc04g009300.4.1

Solyc04g009300.4.1


Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 620.0)


Gene families : OG0003350 (Archaeplastida) Phylogenetic Tree(s): OG0003350_tree ,
OG_05_0003850 (LandPlants) Phylogenetic Tree(s): OG_05_0003850_tree ,
OG_06_0006021 (SeedPlants) Phylogenetic Tree(s): OG_06_0006021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009300.4.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00268300 evm_27.TU.AmTr_v1... GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.05 Archaeplastida
AMTR_s00006p00036530 evm_27.TU.AmTr_v1... GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.02 Archaeplastida
AMTR_s00064p00187430 evm_27.TU.AmTr_v1... GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 Archaeplastida
AT3G57180 BPG2 P-loop containing nucleoside triphosphate hydrolases... 0.14 Archaeplastida
GSVIVT01033559001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.1 Archaeplastida
Gb_19145 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 Archaeplastida
Gb_23819 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 Archaeplastida
LOC_Os06g30380.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.07 Archaeplastida
Mp7g03470.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 Archaeplastida
Pp3c18_21830V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.09 Archaeplastida
Solyc01g006180.4.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 Archaeplastida
Zm00001e024057_P001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009235 cobalamin metabolic process IEP Neighborhood
BP GO:0009236 cobalamin biosynthetic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006073 GTP_binding_domain 404 478
No external refs found!