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  5. Solyc04g009340.3.1

Solyc04g009340.3.1


Description : U-box domain-containing protein 63 OS=Arabidopsis thaliana (sp|q58fy4|pub63_arath : 143.0)


Gene families : OG0000936 (Archaeplastida) Phylogenetic Tree(s): OG0000936_tree ,
OG_05_0005352 (LandPlants) Phylogenetic Tree(s): OG_05_0005352_tree ,
OG_06_0007200 (SeedPlants) Phylogenetic Tree(s): OG_06_0007200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009340.3.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00116980 evm_27.TU.AmTr_v1... U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_06756 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 Archaeplastida
Gb_34587 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10429276g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_109588g0010 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.04 Archaeplastida
Mp3g02140.1 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 Archaeplastida
Mp3g08800.1 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.05 Archaeplastida
Pp3c14_8770V3.1 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Archaeplastida
Zm00001e010423_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016277_P001 No alias U-box domain-containing protein 63 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!