Solyc04g009660.2.1

Description : Disease resistance protein RPP13 OS=Arabidopsis thaliana (sp|q9m667|rpp13_arath : 435.0)

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g009660.2.1
Cluster	HCCA: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00245940	evm_27.TU.AmTr_v1...	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00058p00097500	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00061p00086800	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00061p00163970	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00061p00165330	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00061p00165400	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00061p00207600	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00090p00087950	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.05	Archaeplastida
AMTR_s00090p00088070	evm_27.TU.AmTr_v1...	No description available	0.05	Archaeplastida
AMTR_s00090p00091780	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00090p00137350	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00190p00029950	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s02154p00002280	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.05	Archaeplastida
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.08	Archaeplastida
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.09	Archaeplastida
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.05	Archaeplastida
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.04	Archaeplastida
Gb_01300	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.03	Archaeplastida
Gb_10845	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.02	Archaeplastida
Gb_25801	No alias	Probable disease resistance protein At5g63020...	0.03	Archaeplastida
Gb_25804	No alias	Probable disease resistance protein At1g61180...	0.02	Archaeplastida
Gb_26463	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.06	Archaeplastida
Gb_27427	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.03	Archaeplastida
Gb_40379	No alias	Putative disease resistance protein At1g58400...	0.03	Archaeplastida
LOC_Os11g35580.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_180285g0010	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.04	Archaeplastida
MA_75771g0010	No alias	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.03	Archaeplastida
Solyc02g084890.3.1	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.04	Archaeplastida
Solyc04g009130.4.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc04g009690.2.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc07g053010.3.1	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.05	Archaeplastida
Solyc08g005440.3.1	No alias	RPM1 effector-triggered immunity CC-NLR-type effector receptor	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	158	400

External Links

No external refs found!

Solyc04g009660.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation