Solyc04g009690.2.1


Description : Disease resistance protein RPP13 OS=Arabidopsis thaliana (sp|q9m667|rpp13_arath : 390.0)


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009690.2.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00044p00196010 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00061p00163970 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00061p00165330 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00061p00165400 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00061p00205330 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 Archaeplastida
AMTR_s00061p00205780 evm_27.TU.AmTr_v1... Putative disease resistance RPP13-like protein 3... 0.03 Archaeplastida
AMTR_s00088p00057720 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00090p00088070 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00090p00091770 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00090p00137350 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00190p00027950 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s02154p00002280 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.06 Archaeplastida
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.12 Archaeplastida
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.12 Archaeplastida
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.13 Archaeplastida
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G58848 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G59218 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G59620 CW9 Disease resistance protein (CC-NBS-LRR class) family 0.07 Archaeplastida
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.05 Archaeplastida
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.07 Archaeplastida
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.06 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.11 Archaeplastida
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.11 Archaeplastida
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.07 Archaeplastida
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT5G48620 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.29 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
GSVIVT01007238001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018564001 No alias Putative disease resistance RPP13-like protein 3... 0.04 Archaeplastida
GSVIVT01024090001 No alias Disease susceptibility protein LOV1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01024099001 No alias Putative disease resistance protein At1g50180... 0.05 Archaeplastida
GSVIVT01024100001 No alias Putative disease resistance protein At1g50180... 0.06 Archaeplastida
GSVIVT01026725001 No alias Putative disease resistance protein At1g50180... 0.04 Archaeplastida
GSVIVT01026728001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01026742001 No alias Putative disease resistance protein At1g50180... 0.04 Archaeplastida
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
GSVIVT01026750001 No alias Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.05 Archaeplastida
Gb_10846 No alias Probable disease resistance protein At1g61180... 0.05 Archaeplastida
Gb_37038 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_40379 No alias Putative disease resistance protein At1g58400... 0.04 Archaeplastida
Gb_40740 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.04 Archaeplastida
LOC_Os01g33810.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os04g14220.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g10260.1 No alias no description available(sp|q2r8l1|rga5s_orysj : 447.0) 0.05 Archaeplastida
LOC_Os08g16070.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os10g21400.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g11960.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g11990.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g12000.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g12050.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g12320.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g12340.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g12350.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os12g09710.1 No alias no description available(sp|p0do08|pikm2_orysj : 311.0) 0.04 Archaeplastida
MA_10429865g0020 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.04 Archaeplastida
MA_10435230g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_10436323g0010 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
MA_423032g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6672601g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6828207g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7138672g0010 No alias No annotation 0.03 Archaeplastida
MA_9473823g0010 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Solyc04g009110.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc04g009120.3.1 No alias Putative disease resistance RPP13-like protein 3... 0.03 Archaeplastida
Solyc04g009240.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc04g009660.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g025860.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g039400.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g053010.3.1 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 48 290
No external refs found!