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  5. AMTR_s00024p00231980

AMTR_s00024p00231980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.248

Description : Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase


Gene families : OG0000816 (Archaeplastida) Phylogenetic Tree(s): OG0000816_tree ,
OG_05_0000577 (LandPlants) Phylogenetic Tree(s): OG_05_0000577_tree ,
OG_06_0000434 (SeedPlants) Phylogenetic Tree(s): OG_06_0000434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00231980
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g43510.1 No alias aromatic L-amino acid decarboxylase 0.02 Archaeplastida
LOC_Os08g04540.1 No alias aromatic L-amino acid decarboxylase 0.06 Archaeplastida
LOC_Os10g23900.1 No alias aromatic L-amino acid decarboxylase 0.03 Archaeplastida
Pp3c4_30950V3.1 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Archaeplastida
Pp3s64_90V3.1 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Archaeplastida
Zm00001e000632_P001 No alias aromatic L-amino acid decarboxylase 0.06 Archaeplastida
Zm00001e004837_P001 No alias aromatic L-amino acid decarboxylase 0.04 Archaeplastida
Zm00001e021101_P001 No alias aromatic L-amino acid decarboxylase 0.04 Archaeplastida
Zm00001e040288_P001 No alias aromatic L-amino acid decarboxylase 0.03 Archaeplastida
Zm00001e040289_P001 No alias aromatic L-amino acid decarboxylase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 39 201
No external refs found!