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Description : Probable pectate lyase 4 OS=Arabidopsis thaliana (sp|q9c8g4|ply4_arath : 189.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 172.3)
Gene families : OG0004925 (Archaeplastida) Phylogenetic Tree(s): OG0004925_tree ,
OG_05_0003759 (LandPlants) Phylogenetic Tree(s): OG_05_0003759_tree ,
OG_06_0003803 (SeedPlants) Phylogenetic Tree(s): OG_06_0003803_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g010230.4.1 | |
| Cluster | HCCA: Cluster_229 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006914 | autophagy | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Neighborhood |
| BP | GO:0016073 | snRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016180 | snRNA processing | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Neighborhood |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Neighborhood |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0043628 | ncRNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Neighborhood |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 76 | 237 |
| No external refs found! |