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  5. AMTR_s00024p00232320

AMTR_s00024p00232320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.250

No description available


Gene families : OG0006421 (Archaeplastida) Phylogenetic Tree(s): OG0006421_tree ,
OG_05_0004718 (LandPlants) Phylogenetic Tree(s): OG_05_0004718_tree ,
OG_06_0004058 (SeedPlants) Phylogenetic Tree(s): OG_06_0004058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00232320
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G02180 No alias ferredoxin-related 0.02 Archaeplastida
GSVIVT01035471001 No alias F-box protein SKP2A OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_02176 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g58740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g35710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g088620.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc07g063740.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016303_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e022206_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!