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  5. AMTR_s00024p00233110

AMTR_s00024p00233110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.254

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0001536 (SeedPlants) Phylogenetic Tree(s): OG_06_0001536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00233110
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00138180 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00047p00138210 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.04 Archaeplastida
AMTR_s00056p00219240 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G63730 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT3G44400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G17680 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
Gb_30989 No alias effector receptor (NLR) 0.03 Archaeplastida
Gb_33268 No alias effector receptor (NLR) 0.02 Archaeplastida
Pp3c6_19080V3.1 No alias target of AVRB operation1 0.02 Archaeplastida
Solyc01g014840.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc04g007320.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0000922 spindle pole IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
CC GO:0005815 microtubule organizing center IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR000157 TIR_dom 3 136
IPR001611 Leu-rich_rpt 615 633
IPR001611 Leu-rich_rpt 849 871
IPR025875 Leu-rich_rpt_4 755 790
IPR002182 NB-ARC 185 456
No external refs found!