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  5. Solyc04g011610.3.1

Solyc04g011610.3.1


Description : E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana (sp|q940t5|rduf2_arath : 265.0)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0004757 (LandPlants) Phylogenetic Tree(s): OG_05_0004757_tree ,
OG_06_0002639 (SeedPlants) Phylogenetic Tree(s): OG_06_0002639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g011610.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00258330 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT3G51325 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT3G56580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01034134001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc11g010860.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR010543 DUF1117 271 376
IPR001841 Znf_RING 194 236
No external refs found!