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  5. Solyc04g011960.2.1

Solyc04g011960.2.1


Description : Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum (sp|q6l438|r1a6_solde : 348.0)


Gene families : OG0002721 (Archaeplastida) Phylogenetic Tree(s): OG0002721_tree ,
OG_05_0001818 (LandPlants) Phylogenetic Tree(s): OG_05_0001818_tree ,
OG_06_0000911 (SeedPlants) Phylogenetic Tree(s): OG_06_0000911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g011960.2.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Solyc04g011990.3.1 No alias Putative late blight resistance protein homolog R1A-6... 0.03 Archaeplastida
Solyc05g008070.4.1 No alias Putative late blight resistance protein homolog R1B-16... 0.03 Archaeplastida
Solyc07g009180.1.1 No alias Putative late blight resistance protein homolog R1A-6... 0.05 Archaeplastida
Solyc07g049700.1.1 No alias Putative late blight resistance protein homolog R1A-6... 0.01 Archaeplastida
Solyc08g005500.4.1 No alias Putative late blight resistance protein homolog R1A-6... 0.05 Archaeplastida
Solyc08g074250.3.1 No alias Putative late blight resistance protein homolog R1A-6... 0.04 Archaeplastida
Solyc11g006630.1.1 No alias Putative late blight resistance protein homolog R1B-12... 0.05 Archaeplastida
Solyc11g006640.3.1 No alias Putative late blight resistance protein homolog R1A-6... 0.05 Archaeplastida
Solyc11g020100.3.1 No alias Putative late blight resistance protein homolog R1B-12... 0.03 Archaeplastida
Solyc12g009450.3.1 No alias Putative late blight resistance protein homolog R1B-16... 0.04 Archaeplastida
Solyc12g009460.1.1 No alias Putative late blight resistance protein homolog R1A-6... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 152 378
No external refs found!