Solyc04g012050.3.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0086161 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g012050.3.1
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT1G33760	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.05	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G25820	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G16280	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G16770	ERF72, EBP, ATEBP, RAP2.3	ethylene-responsive element binding protein	0.03	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.04	Archaeplastida
AT3G50260	DEAR1, CEJ1, ATERF#011	cooperatively regulated by ethylene and jasmonate 1	0.05	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G11190	SHN3	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G19790	RAP2.11	related to AP2 11	0.04	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G43410	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01008649001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013913001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01013931001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_07992	No alias	Ethylene-responsive transcription factor RAP2-9...	0.03	Archaeplastida
Gb_08031	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26067	No alias	transcription factor (ERF)	0.08	Archaeplastida
Gb_26855	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26856	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26857	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_34846	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os01g73770.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os02g35240.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g45450.1	No alias	Dehydration-responsive element-binding protein 1G...	0.04	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os02g54050.1	No alias	Ethylene-responsive transcription factor ERF018...	0.05	Archaeplastida
LOC_Os03g09170.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os03g22170.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g44670.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.06	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os09g28440.1	No alias	transcription factor (ERF)	0.08	Archaeplastida
MA_10031781g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_100724g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10082062g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10370681g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10436654g0010	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_12171g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_203191g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_27309g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_288689g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_420358g0010	No alias	Ethylene-responsive transcription factor 1A...	0.04	Archaeplastida
MA_428433g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_6677438g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_7168929g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_924346g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_959784g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9785986g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c11_24520V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c15_1990V3.1	No alias	erf domain protein 9	0.05	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_3770V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Pp3c26_1890V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Pp3c27_5180V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Smo409196	No alias	External stimuli response.biotic...	0.02	Archaeplastida
Solyc01g057080.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.04	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g005520.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc04g014530.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc06g065820.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g066350.1.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e000400_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014413_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015429_P001	No alias	transcription factor (DREB)	0.07	Archaeplastida
Zm00001e015946_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e021331_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e029041_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e033541_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e038819_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e041539_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e041815_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	156	205

External Links

No external refs found!

Solyc04g012050.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation