Description : RING-H2-class E3 ligase
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0031697 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc04g014220.1.1 | |
Cluster | HCCA: Cluster_11 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00267830 | evm_27.TU.AmTr_v1... | Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase | 0.03 | Archaeplastida | |
AMTR_s00025p00229930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
AT1G22500 | No alias | RING/U-box superfamily protein | 0.05 | Archaeplastida | |
AT4G35480 | RHA3B | RING-H2 finger A3B | 0.03 | Archaeplastida | |
AT4G38140 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
AT5G05280 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
AT5G06490 | No alias | RING/U-box superfamily protein | 0.06 | Archaeplastida | |
GSVIVT01012015001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
GSVIVT01012022001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
GSVIVT01028038001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | Archaeplastida | |
GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
Gb_14762 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
Gb_14785 | No alias | RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
Gb_15836 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
LOC_Os01g20930.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
LOC_Os02g45780.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
LOC_Os03g22110.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_10260361g0010 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
MA_6931619g0010 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
Solyc01g095820.2.1 | No alias | RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... | 0.08 | Archaeplastida | |
Zm00001e027277_P001 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
Zm00001e037107_P001 | No alias | RING-H2-class E3 ligase | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Neighborhood |
BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | Neighborhood |
BP | GO:0006101 | citrate metabolic process | IEP | Neighborhood |
BP | GO:0006820 | anion transport | IEP | Neighborhood |
BP | GO:0006835 | dicarboxylic acid transport | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Neighborhood |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
BP | GO:0009606 | tropism | IEP | Neighborhood |
BP | GO:0010274 | hydrotropism | IEP | Neighborhood |
BP | GO:0015711 | organic anion transport | IEP | Neighborhood |
BP | GO:0015740 | C4-dicarboxylate transport | IEP | Neighborhood |
BP | GO:0015743 | malate transport | IEP | Neighborhood |
BP | GO:0015849 | organic acid transport | IEP | Neighborhood |
BP | GO:0015977 | carbon fixation | IEP | Neighborhood |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
BP | GO:0016999 | antibiotic metabolic process | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0046942 | carboxylic acid transport | IEP | Neighborhood |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 138 | 181 |
No external refs found! |