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  5. Solyc04g014460.4.1

Solyc04g014460.4.1


Description : mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP trafficking complex


Gene families : OG0001027 (Archaeplastida) Phylogenetic Tree(s): OG0001027_tree ,
OG_05_0000803 (LandPlants) Phylogenetic Tree(s): OG_05_0000803_tree ,
OG_06_0000994 (SeedPlants) Phylogenetic Tree(s): OG_06_0000994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g014460.4.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.40 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
LOC_Os08g33120.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
Zm00001e022419_P005 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.04 Archaeplastida
Zm00001e033165_P001 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005956 protein kinase CK2 complex IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 99 167
IPR025715 FoP_C 206 265
No external refs found!