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  4. Sequence
  5. Solyc04g015610.3.1

Solyc04g015610.3.1


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0009836 (LandPlants) Phylogenetic Tree(s): OG_05_0009836_tree ,
OG_06_0008062 (SeedPlants) Phylogenetic Tree(s): OG_06_0008062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g015610.3.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00103540 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00264p00012960 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G80240 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT2G34510 No alias Protein of unknown function, DUF642 0.02 Archaeplastida
AT2G41800 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT2G41810 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.05 Archaeplastida
AT5G11420 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
Gb_04470 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g34690.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g42520.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g11040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g41710.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g41740.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g41750.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g04050.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g10620.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_201516g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_44504g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_4501g0020 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_6019571g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_770477g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g120040.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g067910.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g067030.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g042930.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007711_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e007713_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007714_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e013973_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019773_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029029_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041141_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 197 364
IPR006946 DUF642 30 186
No external refs found!