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  5. Solyc04g040120.1.1

Solyc04g040120.1.1


Description : omega-3/omega-6 fatty acid desaturase


Gene families : OG0001897 (Archaeplastida) Phylogenetic Tree(s): OG0001897_tree ,
OG_05_0001673 (LandPlants) Phylogenetic Tree(s): OG_05_0001673_tree ,
OG_06_0002040 (SeedPlants) Phylogenetic Tree(s): OG_06_0002040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g040120.1.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Solyc03g058430.3.1 No alias omega-3/omega-6 fatty acid desaturase 0.05 Archaeplastida
Solyc04g040130.1.1 No alias omega-3/omega-6 fatty acid desaturase 0.06 Archaeplastida
Solyc12g045035.1.1 No alias omega-3/omega-6 fatty acid desaturase 0.04 Archaeplastida
Solyc12g049030.1.1 No alias omega-3/omega-6 fatty acid desaturase 0.05 Archaeplastida
Solyc12g100250.3.1 No alias omega-3/omega-6 fatty acid desaturase 0.05 Archaeplastida
Zm00001e023386_P002 No alias omega-3/omega-6 fatty acid desaturase 0.04 Archaeplastida
Zm00001e039637_P001 No alias omega-3/omega-6 fatty acid desaturase 0.03 Archaeplastida
Zm00001e039638_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042261_P001 No alias omega-3/omega-6 fatty acid desaturase 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR021863 FAS_N 20 58
IPR005804 FA_desaturase_dom 77 336
No external refs found!