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  5. Solyc04g040160.4.1

Solyc04g040160.4.1


Description : Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana (sp|q8w496|ptc52_arath : 608.0)


Gene families : OG0001120 (Archaeplastida) Phylogenetic Tree(s): OG0001120_tree ,
OG_05_0004975 (LandPlants) Phylogenetic Tree(s): OG_05_0004975_tree ,
OG_06_0005252 (SeedPlants) Phylogenetic Tree(s): OG_06_0005252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g040160.4.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00127460 evm_27.TU.AmTr_v1... Protochlorophyllide-dependent translocon component 52,... 0.04 Archaeplastida
Cpa|evm.model.tig00000681.17 No alias Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01025446001 No alias Protochlorophyllide-dependent translocon component 52,... 0.06 Archaeplastida
Gb_35364 No alias Protochlorophyllide-dependent translocon component 52,... 0.03 Archaeplastida
Gb_36694 No alias Protochlorophyllide-dependent translocon component 52,... 0.03 Archaeplastida
LOC_Os03g05310.1 No alias pheophorbide a oxygenase (PAO) 0.03 Archaeplastida
LOC_Os03g59120.1 No alias Protochlorophyllide-dependent translocon component 52,... 0.06 Archaeplastida
MA_10436082g0010 No alias Protochlorophyllide-dependent translocon component 52,... 0.02 Archaeplastida
Pp3c3_19130V3.1 No alias Pheophorbide a oxygenase family protein with Rieske... 0.03 Archaeplastida
Zm00001e006067_P001 No alias Protochlorophyllide-dependent translocon component 52,... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009584 detection of visible light IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016851 magnesium chelatase activity IEP Neighborhood
BP GO:0018298 protein-chromophore linkage IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Neighborhood
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013626 PaO 303 405
IPR017941 Rieske_2Fe-2S 87 169
No external refs found!