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  5. Solyc04g049470.2.1

Solyc04g049470.2.1


Description : Histone H3.3a OS=Lilium longiflorum (sp|q402e2|h33a_lillo : 92.4)


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0108521 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0086306 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g049470.2.1
Cluster HCCA: Cluster_503

Target Alias Description ECC score Gene Family Method Actions
AT1G19890 ATMGH3, MGH3 male-gamete-specific histone H3 0.01 Archaeplastida
GSVIVT01018808001 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 41 83
No external refs found!