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  5. Solyc04g050865.1.1

Solyc04g050865.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 110.0)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g050865.1.1
Cluster HCCA: Cluster_509

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00185490 No alias No description available 0.01 Archaeplastida
Solyc01g009165.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.14 Archaeplastida
Solyc02g014547.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida
Solyc02g033035.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.2 Archaeplastida
Solyc04g007855.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc04g064805.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc04g150146.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc06g035495.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc06g036255.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g043685.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.17 Archaeplastida
Solyc08g062725.1.1 No alias No annotation 0.01 Archaeplastida
Solyc10g038045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc11g012995.1.1 No alias No annotation 0.04 Archaeplastida
Solyc11g028105.1.1 No alias No annotation 0.2 Archaeplastida
Solyc11g056595.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 3 63
No external refs found!