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  5. Solyc04g050990.3.1

Solyc04g050990.3.1


Description : F-box protein At2g02240 OS=Arabidopsis thaliana (sp|q3e6p4|fb95_arath : 247.0)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g050990.3.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G63090 PP2-A11, AtPP2-A11 phloem protein 2-A11 0.03 Archaeplastida
AT4G19840 PP2-A1,... phloem protein 2-A1 0.03 Archaeplastida
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.06 Archaeplastida
LOC_Os02g56770.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g56800.1 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g56810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g02550.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os12g03594.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g03740.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429303g0020 No alias F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10430103g0010 No alias F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10434357g0020 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g08250.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g069020.3.1 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g056680.2.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g098190.2.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e016194_P002 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e041427_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 105 295
No external refs found!