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  5. Solyc04g051540.3.1

Solyc04g051540.3.1


Description : transcription factor (WRKY)


Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g051540.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00164440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
AMTR_s00156p00038330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.06 Archaeplastida
AT2G44745 No alias WRKY family transcription factor 0.05 Archaeplastida
AT4G39410 ATWRKY13, WRKY13 WRKY DNA-binding protein 13 0.06 Archaeplastida
AT5G41570 ATWRKY24, WRKY24 WRKY DNA-binding protein 24 0.02 Archaeplastida
GSVIVT01018300001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01020864001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.06 Archaeplastida
GSVIVT01022259001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01030174001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.06 Archaeplastida
GSVIVT01034148001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
GSVIVT01036223001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
Gb_17074 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os02g16540.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os04g51560.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os10g42850.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_17107g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_22356g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6790522g0010 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_8710165g0010 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_934202g0010 No alias transcription factor (WRKY) 0.03 Archaeplastida
Pp3c11_1840V3.1 No alias WRKY DNA-binding protein 23 0.02 Archaeplastida
Pp3c7_24490V3.1 No alias WRKY DNA-binding protein 57 0.02 Archaeplastida
Solyc01g089960.3.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e002502_P001 No alias transcription factor (WRKY) 0.05 Archaeplastida
Zm00001e003146_P002 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e005626_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e007834_P002 No alias transcription factor (WRKY) 0.06 Archaeplastida
Zm00001e015531_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e018502_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR003657 WRKY_dom 158 214
No external refs found!