1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g054150.2.1

Solyc04g054150.2.1


Description : no hits & (original description: none)


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0000244 (LandPlants) Phylogenetic Tree(s): OG_05_0000244_tree ,
OG_06_0000165 (SeedPlants) Phylogenetic Tree(s): OG_06_0000165_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g054150.2.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00202310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.03 Archaeplastida
GSVIVT01010264001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
GSVIVT01014690001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
GSVIVT01017741001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.05 Archaeplastida
GSVIVT01022214001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.05 Archaeplastida
Gb_13217 No alias non-catalytic component Dpb4 of DNA polymerase epsilon complex 0.03 Archaeplastida
MA_172383g0010 No alias No annotation 0.03 Archaeplastida
Solyc01g099320.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Solyc05g005390.3.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Zm00001e010728_P001 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Zm00001e015699_P001 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e015700_P001 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e021676_P001 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e036848_P001 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!