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  5. Solyc04g054450.1.1

Solyc04g054450.1.1


Description : no description available(sp|f4j8g2|rlp33_arath : 434.0)


Gene families : OG0010370 (Archaeplastida) Phylogenetic Tree(s): OG0010370_tree ,
OG_05_0010354 (LandPlants) Phylogenetic Tree(s): OG_05_0010354_tree ,
OG_06_0009273 (SeedPlants) Phylogenetic Tree(s): OG_06_0009273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g054450.1.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Solyc12g009730.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 Archaeplastida
Solyc12g009780.1.1 No alias Receptor-like protein 6 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 325 339
IPR001611 Leu-rich_rpt 299 314
IPR013210 LRR_N_plant-typ 31 78
IPR001611 Leu-rich_rpt 185 241
IPR001611 Leu-rich_rpt 447 505
IPR001611 Leu-rich_rpt 519 579
IPR001611 Leu-rich_rpt 667 722
IPR001611 Leu-rich_rpt 134 156
IPR001611 Leu-rich_rpt 400 421
No external refs found!