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  5. Solyc04g054480.3.1

Solyc04g054480.3.1


Description : CSI-type cellulose synthase CSC-interactive protein


Gene families : OG0002727 (Archaeplastida) Phylogenetic Tree(s): OG0002727_tree ,
OG_05_0001913 (LandPlants) Phylogenetic Tree(s): OG_05_0001913_tree ,
OG_06_0001932 (SeedPlants) Phylogenetic Tree(s): OG_06_0001932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g054480.3.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008840001 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 Archaeplastida
GSVIVT01022187001 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 Archaeplastida
Gb_38411 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 Archaeplastida
LOC_Os06g11990.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.1 Archaeplastida
LOC_Os11g08090.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 Archaeplastida
MA_10044709g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10434233g0010 No alias CSI-type cellulose synthase CSC-interactive protein 0.04 Archaeplastida
MA_10435637g0020 No alias CSI-type cellulose synthase CSC-interactive protein 0.05 Archaeplastida
Pp3c19_16450V3.1 No alias binding 0.09 Archaeplastida
Pp3c19_16600V3.1 No alias binding 0.06 Archaeplastida
Smo78846 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.07 Archaeplastida
Zm00001e036124_P001 No alias CSI-type cellulose synthase CSC-interactive protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000008 C2_dom 1649 1741
IPR000225 Armadillo 89 119
No external refs found!