Solyc04g054910.4.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000849 (SeedPlants) Phylogenetic Tree(s): OG_06_0000849_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g054910.4.1
Cluster	HCCA: Cluster_245

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00069p00141520	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G21910	DREB26	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G53910	RAP2.12	related to AP2 12	0.04	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.04	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01021060001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028316001	No alias	No description available	0.03	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.03	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01035098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01036201001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01212	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_06377	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_08541	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.05	Archaeplastida
Gb_17210	No alias	transcription factor (DREB). C2H2 zinc finger...	0.03	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17212	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_34286	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_35474	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_36010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_41445	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g35240.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g42585.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os08g31580.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os09g11460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
LOC_Os09g13940.2	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os10g41130.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_100724g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10082062g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_1037g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10426586g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10436654g0010	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_120531g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_12171g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_166248g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_168025g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_180106g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_184464g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_198113g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_203191g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_27309g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_288689g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_329325g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_40338g0010	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
MA_42369g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_5530g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_6305g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_65985g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_7166g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_7168929g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
MA_82481g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_8518489g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_8984558g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_957g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c26_13260V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g090560.4.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.05	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g054630.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc08g007820.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc09g089920.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g050970.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e023686_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e023870_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e033072_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Zm00001e034242_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e035334_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006644	phospholipid metabolic process	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	77	126

External Links

No external refs found!

Solyc04g054910.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation