1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g055225.1.1

Solyc04g055225.1.1


Description : Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana (sp|p92519|m810_arath : 159.0)


Gene families : OG0000940 (Archaeplastida) Phylogenetic Tree(s): OG0000940_tree ,
OG_05_0000578 (LandPlants) Phylogenetic Tree(s): OG_05_0000578_tree ,
OG_06_0000281 (SeedPlants) Phylogenetic Tree(s): OG_06_0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g055225.1.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Solyc01g066065.1.1 No alias No annotation 0.01 Archaeplastida
Solyc02g090397.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc03g082845.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g083965.1.1 No alias No annotation 0.01 Archaeplastida
Solyc06g009015.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 Archaeplastida
Solyc07g015873.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.01 Archaeplastida
Solyc07g019433.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.01 Archaeplastida
Solyc08g066927.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc10g076435.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g005615.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.01 Archaeplastida
Solyc12g062203.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 309 374
No external refs found!